File formats
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Input file format (Protein search and Palmitoyl-proteome comparison)
The input file format must be plain text and not zipped.
Examples:
tab-separated file formats are also supported. In this case the first column will be taken into account.
If the first column contains more than one identifiers separated by comma or semicolon, all identifiers will be taken into account.
Following column headers are filtered out: UniProt AC, up_ac, up_id, gene_name, ensembl_id.
Lines starting with # are filtered out.
The list of supported identifiers is the following: UniProt AC, UniProt secondary AC, UniProt ID, UniProt gene name, Ensembl protein, Ensembl gene, Refseq protein ID, IPI ID, UniGene ID, PomBase ID, MGI ID, RGD ID, TAIR protein ID, EuPathDb IDwith UniProt AC:Q4WCM2 P17124 Q8NBJ9 Q5T9A4 Q14728 Q9UTN4 P08647 Q5M8N0 Q8IJH8 Q8I5I3
with UniProt ID:RTCB_HUMAN 1B47_HUMAN TSHR_HUMAN K2C1_HUMAN PRDX5_HUMAN MYP2_HUMAN ATP6_HUMAN VPP1_HUMAN RELL1_HUMAN UNC5B_HUMAN
with Ensembl ID:ENSP00000453745 ENSP00000340260 ENSP00000360366 ENSP00000230048 ENSP00000445552 ENSP00000303246 ENSP00000357807 ENSP00000414066 ENSP00000309477
with gene names:ADAMTS1 AGL ANGPTL4 CALML5 CCDC101 CD70 CD97 CDH10 CEP131 CLDND1
